CV

Education

• B.S. in Electronic and Information Engineering, Yanshan University, 2012
• M.S. in Biomedical Engineering, Southeast University, 2016
• Ph.D in Computer Science and Technology, Southeast University, 2024 (expected)

Skills

• C++ / C / QT
• Python / Matlab / R

Projects

• Massive Bioimaging data management
• Neuron morphology reconstruction
• Screen-wall based data visualization
• Open-databasing of brain-wide neuron morphometry

Publications

Binocular encoding in the damselfly pre-motor target tracking system

Supple, J. A., Pinto-Benito, D., Khoo, C., Wardill, T. J., Fabian, S. T., Liu, M., ... & Gonzalez-Bellido, P. T. (2020). Binocular encoding in the damselfly pre-motor target tracking system. Current Biology, 30(4), 645-656.

Image enhancement to leverage the 3D morphological reconstruction of single-cell neurons

Guo, S., Zhao, X., Jiang, S., Ding, L., & Peng, H. (2022). Image enhancement to leverage the 3D morphological reconstruction of single-cell neurons. Bioinformatics, 38(2), 503-512.

A multimodal cell census and atlas of the mammalian primary motor cortex

Principal manuscript editors, Analysis coordination, Integrated data analysis Armand Ethan 42 Yao Zizhen 5, ATAC-seq data generation and processing Fang Rongxin 45 Hou Xiaomeng 10 Lucero Jacinta D. 18 Osteen Julia K. 18 Pinto-Duarte Antonio 18 Poirion Olivier 10 Preissl Sebastian 10 Wang Xinxin 10 97, Epi-retro-seq data generation and processing Dominguez Bertha 53 Ito-Cole Tony 1 Jacobs Matthew 1 Jin Xin 54 99 100 Lee Cheng-Ta 53 Lee Kuo-Fen 53 Miyazaki Paula Assakura 1 Pang Yan 1 Rashid Mohammad 1 Smith Jared B. 54 Vu Minh 1 Williams Elora 54, OLST/STPT and other data generation Narasimhan Arun 6 Palaniswamy Ramesh 6, ... & Project management Kelly Kathleen 6 Mok Stephanie 5 Sunkin Susan 5. (2021). A multimodal cell census and atlas of the mammalian primary motor cortex. Nature, 598(7879), 86-102.

Morphological diversity of single neurons in molecularly defined cell types

Peng, H., Xie, P., Liu, L., Kuang, X., Wang, Y., Qu, L., ... & Zeng, H. (2021). Morphological diversity of single neurons in molecularly defined cell types. Nature, 598(7879), 174-181.

Petabyte-Scale Multi-Morphometry of Single Neurons for Whole Brains

Jiang, S., Wang, Y., Liu, L., Ding, L., Ruan, Z., Dong, H. W., ... & Peng, H. (2022). Petabyte-scale multi-morphometry of single neurons for whole brains. Neuroinformatics, 20(2), 525-536.

NRRS: A re-tracing strategy to refine neuron reconstruction

Li, Y., Jiang, S., Ding, L., & Liu, L. (2023). NRRS: A re-tracing strategy to refine neuron reconstruction. Bioinformatics Advances, 3(1), vbad054.

A guide to the BRAIN Initiative Cell Census Network data ecosystem

Hawrylycz, M., Martone, M. E., Ascoli, G. A., Bjaalie, J. G., Dong, H. W., Ghosh, S. S., ... & Zingg, B. (2023). A guide to the BRAIN Initiative Cell Census Network data ecosystem. PLoS biology, 21(6), e3002133.

Full-Spectrum Neuronal Diversity and Stereotypy through Whole Brain Morphometry

Liu, Y., Jiang, S., Li, Y., Zhao, S., Yun, Z., Zhao, Z. H., ... & Peng, H. (2023). Full-Spectrum Neuronal Diversity and Stereotypy through Whole Brain Morphometry. Research Square.

Non-homogenous axonal bouton distribution in whole-brain single-cell neuronal networks

Qian P, Manubens-Gil L, Jiang S, et al. Non-homogenous axonal bouton distribution in whole-brain single cell neuronal networks[J]. Cell reports 43, 113871

Beyond Static Brain Atlases: AI-Powered Open Databasing and Dynamic Mining of Brain-Wide Neuron Morphometry

Jiang, S., Wang, L., Yun, Z., Chen, H., Yao, J., & Peng, H. (2024). Beyond Static Brain Atlases: AI-Powered Open Databasing and Dynamic Mining of Brain-Wide Neuron Morphometry (p. 2024.09.22.614319). bioRxiv. https://doi.org/10.1101/2024.09.22.614319